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Bug in Imread function #340

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NimaMojtahedi opened this issue Aug 18, 2023 · 2 comments
Open

Bug in Imread function #340

NimaMojtahedi opened this issue Aug 18, 2023 · 2 comments

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@NimaMojtahedi
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Describe the issue:

Minimal Complete Verifiable Example:

# Put your MCVE code here

Anything else we need to know?:

Environment:

  • Dask version:'2023.5.0'
  • Python version:3.8
  • Operating System:Linux , Ubuntu 22.04.2 LTS
  • Install method (conda, pip, source): pip

For some .tiff files (volumetric files, images with more than 2 dimensions), imread function returns only 1 frame. I checked pims you are using in dask-image imread and it seems it is pims issues can not load file correctly.

@jakirkham
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Thanks for the report! 🙏

Could you please share an image file that demonstrates this issue?

@NimaMojtahedi
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NimaMojtahedi commented Aug 21, 2023

Unfortunately it is not possible to share the data. It is sensitive data and I cannot publicly share it.
I think the issue is with tiff files bigger than 4 GB, probably saved in imagej format such as 1.11b

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