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Update dependencies
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charleskawczynski committed Sep 27, 2024
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102 changes: 50 additions & 52 deletions docs/Manifest.toml
Original file line number Diff line number Diff line change
Expand Up @@ -5,9 +5,9 @@ manifest_format = "2.0"
project_hash = "3ae99981f6aa65176c8d6d080782260708924b10"

[[deps.ADTypes]]
git-tree-sha1 = "99a6f5d0ce1c7c6afdb759daa30226f71c54f6b0"
git-tree-sha1 = "eea5d80188827b35333801ef97a40c2ed653b081"
uuid = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
version = "1.7.1"
version = "1.9.0"
weakdeps = ["ChainRulesCore", "EnzymeCore"]

[deps.ADTypes.extensions]
Expand Down Expand Up @@ -286,9 +286,9 @@ version = "1.18.0+2"

[[deps.ChainRulesCore]]
deps = ["Compat", "LinearAlgebra"]
git-tree-sha1 = "71acdbf594aab5bbb2cec89b208c41b4c411e49f"
git-tree-sha1 = "3e4b134270b372f2ed4d4d0e936aabaefc1802bc"
uuid = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
version = "1.24.0"
version = "1.25.0"
weakdeps = ["SparseArrays"]

[deps.ChainRulesCore.extensions]
Expand All @@ -315,9 +315,9 @@ version = "0.6.4"

[[deps.ClimaCore]]
deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "Unrolled"]
git-tree-sha1 = "806e8490ff1aa664ca579544d798f8addfa1b07d"
git-tree-sha1 = "13c2f4e58c78fa54a22705d15e039c99462112ed"
uuid = "d414da3d-4745-48bb-8d80-42e94e092884"
version = "0.14.15"
version = "0.14.17"

[deps.ClimaCore.extensions]
ClimaCoreCUDAExt = "CUDA"
Expand All @@ -329,9 +329,9 @@ version = "0.14.15"

[[deps.ClimaDiagnostics]]
deps = ["Accessors", "ClimaComms", "ClimaCore", "Dates", "NCDatasets", "SciMLBase"]
git-tree-sha1 = "0c60c2b40b0c5ae87690734e2aedea5a8c686e91"
git-tree-sha1 = "9526b91533254b043e860e17568555d21d1d041e"
uuid = "1ecacbb8-0713-4841-9a07-eb5aa8a2d53f"
version = "0.2.5"
version = "0.2.6"

[[deps.ClimaParams]]
deps = ["TOML"]
Expand All @@ -342,8 +342,6 @@ version = "0.10.14"
[[deps.ClimaTimeSteppers]]
deps = ["ClimaComms", "Colors", "DataStructures", "DiffEqBase", "KernelAbstractions", "Krylov", "LinearAlgebra", "LinearOperators", "NVTX", "SciMLBase", "StaticArrays"]
git-tree-sha1 = "dbc1d2c495f118c36a83fa93cd5311fe3a32f615"
repo-rev = "ck/callback_inference"
repo-url = "https://github.com/CliMA/ClimaTimeSteppers.jl.git"
uuid = "595c0a79-7f3d-439a-bc5a-b232dc3bde79"
version = "0.7.38"

Expand Down Expand Up @@ -619,9 +617,9 @@ uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"

[[deps.Distributions]]
deps = ["AliasTables", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"]
git-tree-sha1 = "e6c693a0e4394f8fda0e51a5bdf5aef26f8235e9"
git-tree-sha1 = "d7477ecdafb813ddee2ae727afa94e9dcb5f3fb0"
uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
version = "0.25.111"
version = "0.25.112"

[deps.Distributions.extensions]
DistributionsChainRulesCoreExt = "ChainRulesCore"
Expand All @@ -647,9 +645,9 @@ version = "1.7.0"

[[deps.DocumenterCitations]]
deps = ["AbstractTrees", "Bibliography", "Dates", "Documenter", "Logging", "Markdown", "MarkdownAST", "OrderedCollections", "Unicode"]
git-tree-sha1 = "c72ee44a4242d8ad932062e7476880243635ce6d"
git-tree-sha1 = "ca601b812efd1155a9bdf9c80e7e0428da598a08"
uuid = "daee34ce-89f3-4625-b898-19384cb65244"
version = "1.3.3"
version = "1.3.4"

[[deps.Downloads]]
deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"]
Expand Down Expand Up @@ -723,9 +721,9 @@ version = "1.8.0"

[[deps.FFTW_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "c6033cc3892d0ef5bb9cd29b7f2f0331ea5184ea"
git-tree-sha1 = "4d81ed14783ec49ce9f2e168208a12ce1815aa25"
uuid = "f5851436-0d7a-5f13-b9de-f02708fd171a"
version = "3.3.10+0"
version = "3.3.10+1"

[[deps.FastBroadcast]]
deps = ["ArrayInterface", "LinearAlgebra", "Polyester", "Static", "StaticArrayInterface", "StrideArraysCore"]
Expand Down Expand Up @@ -878,9 +876,9 @@ version = "0.4.2"

[[deps.GeoInterface]]
deps = ["Extents", "GeoFormatTypes"]
git-tree-sha1 = "5921fc0704e40c024571eca551800c699f86ceb4"
git-tree-sha1 = "2f6fce56cdb8373637a6614e14a5768a88450de2"
uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f"
version = "1.3.6"
version = "1.3.7"

[[deps.GeometryBasics]]
deps = ["EarCut_jll", "Extents", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"]
Expand All @@ -907,9 +905,9 @@ version = "1.3.1"

[[deps.Git_jll]]
deps = ["Artifacts", "Expat_jll", "JLLWrappers", "LibCURL_jll", "Libdl", "Libiconv_jll", "OpenSSL_jll", "PCRE2_jll", "Zlib_jll"]
git-tree-sha1 = "d18fb8a1f3609361ebda9bf029b60fd0f120c809"
git-tree-sha1 = "ea372033d09e4552a04fd38361cd019f9003f4f4"
uuid = "f8c6e375-362e-5223-8a59-34ff63f689eb"
version = "2.44.0+2"
version = "2.46.2+0"

[[deps.Glib_jll]]
deps = ["Artifacts", "Gettext_jll", "JLLWrappers", "Libdl", "Libffi_jll", "Libiconv_jll", "Libmount_jll", "PCRE2_jll", "Zlib_jll"]
Expand Down Expand Up @@ -978,9 +976,9 @@ version = "8.3.1+0"

[[deps.Hwloc_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "5e19e1e4fa3e71b774ce746274364aef0234634e"
git-tree-sha1 = "378267a829b1e17423d32ce6d905f37a12c1fd84"
uuid = "e33a78d0-f292-5ffc-b300-72abe9b543c8"
version = "2.11.1+0"
version = "2.11.1+1"

[[deps.HypergeometricFunctions]]
deps = ["LinearAlgebra", "OpenLibm_jll", "SpecialFunctions"]
Expand Down Expand Up @@ -1093,9 +1091,9 @@ weakdeps = ["Random", "RecipesBase", "Statistics"]
IntervalSetsStatisticsExt = "Statistics"

[[deps.InverseFunctions]]
git-tree-sha1 = "2787db24f4e03daf859c6509ff87764e4182f7d1"
git-tree-sha1 = "a779299d77cd080bf77b97535acecd73e1c5e5cb"
uuid = "3587e190-3f89-42d0-90ee-14403ec27112"
version = "0.1.16"
version = "0.1.17"
weakdeps = ["Dates", "Test"]

[deps.InverseFunctions.extensions]
Expand Down Expand Up @@ -1161,9 +1159,9 @@ version = "0.1.5"

[[deps.JpegTurbo_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "c84a835e1a09b289ffcd2271bf2a337bbdda6637"
git-tree-sha1 = "25ee0be4d43d0269027024d75a24c24d6c6e590c"
uuid = "aacddb02-875f-59d6-b918-886e6ef4fbf8"
version = "3.0.3+0"
version = "3.0.4+0"

[[deps.JuliaNVTXCallbacks_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
Expand All @@ -1173,9 +1171,9 @@ version = "0.2.1+0"

[[deps.KernelAbstractions]]
deps = ["Adapt", "Atomix", "InteractiveUtils", "MacroTools", "PrecompileTools", "Requires", "StaticArrays", "UUIDs", "UnsafeAtomics", "UnsafeAtomicsLLVM"]
git-tree-sha1 = "cb1cff88ef2f3a157cbad75bbe6b229e1975e498"
git-tree-sha1 = "045d41a364a81e357757c566b5a69fd4a2a2c445"
uuid = "63c18a36-062a-441e-b654-da1e3ab1ce7c"
version = "0.9.25"
version = "0.9.26"
weakdeps = ["EnzymeCore", "LinearAlgebra", "SparseArrays"]

[deps.KernelAbstractions.extensions]
Expand Down Expand Up @@ -1246,9 +1244,9 @@ weakdeps = ["Serialization"]

[[deps.LZO_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "70c5da094887fd2cae843b8db33920bac4b6f07d"
git-tree-sha1 = "854a9c268c43b77b0a27f22d7fab8d33cdb3a731"
uuid = "dd4b983a-f0e5-5f8d-a1b7-129d4a5fb1ac"
version = "2.10.2+0"
version = "2.10.2+1"

[[deps.LaTeXStrings]]
git-tree-sha1 = "50901ebc375ed41dbf8058da26f9de442febbbec"
Expand Down Expand Up @@ -1379,9 +1377,9 @@ uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"

[[deps.Lz4_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "7f26c8fc5229e68484e0b3447312c98e16207d11"
git-tree-sha1 = "abf88ff67f4fd89839efcae2f4c39cbc4ecd0846"
uuid = "5ced341a-0733-55b8-9ab6-a4889d929147"
version = "1.10.0+0"
version = "1.10.0+1"

[[deps.MKL_jll]]
deps = ["Artifacts", "IntelOpenMP_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "oneTBB_jll"]
Expand All @@ -1408,9 +1406,9 @@ version = "0.1.11"

[[deps.MPItrampoline_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LazyArtifacts", "Libdl", "MPIPreferences", "TOML"]
git-tree-sha1 = "8c35d5420193841b2f367e658540e8d9e0601ed0"
git-tree-sha1 = "fde81c9f9c94fe5fbeaed7b3f1330305cf9a327c"
uuid = "f1f71cc9-e9ae-5b93-9b94-4fe0e1ad3748"
version = "5.4.0+0"
version = "5.5.0+0"

[[deps.MacroTools]]
deps = ["Markdown", "Random"]
Expand Down Expand Up @@ -1599,9 +1597,9 @@ version = "4.1.6+0"

[[deps.OpenSSL_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "1b35263570443fdd9e76c76b7062116e2f374ab8"
git-tree-sha1 = "7493f61f55a6cce7325f197443aa80d32554ba10"
uuid = "458c3c95-2e84-50aa-8efc-19380b2a3a95"
version = "3.0.15+0"
version = "3.0.15+1"

[[deps.OpenSpecFun_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "Libdl", "Pkg"]
Expand Down Expand Up @@ -1745,9 +1743,9 @@ version = "1.4.3"

[[deps.PrettyTables]]
deps = ["Crayons", "LaTeXStrings", "Markdown", "PrecompileTools", "Printf", "Reexport", "StringManipulation", "Tables"]
git-tree-sha1 = "66b20dd35966a748321d3b2537c4584cf40387c7"
git-tree-sha1 = "1101cd475833706e4d0e7b122218257178f48f34"
uuid = "08abe8d2-0d0c-5749-adfa-8a2ac140af0d"
version = "2.3.2"
version = "2.4.0"

[[deps.Printf]]
deps = ["Unicode"]
Expand All @@ -1772,9 +1770,9 @@ version = "1.0.0"

[[deps.QuadGK]]
deps = ["DataStructures", "LinearAlgebra"]
git-tree-sha1 = "1d587203cf851a51bf1ea31ad7ff89eff8d625ea"
git-tree-sha1 = "cda3b045cf9ef07a08ad46731f5a3165e56cf3da"
uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc"
version = "2.11.0"
version = "2.11.1"

[deps.QuadGK.extensions]
QuadGKEnzymeExt = "Enzyme"
Expand Down Expand Up @@ -1909,9 +1907,9 @@ version = "0.7.0"

[[deps.SIMD]]
deps = ["PrecompileTools"]
git-tree-sha1 = "2803cab51702db743f3fda07dd1745aadfbf43bd"
git-tree-sha1 = "98ca7c29edd6fc79cd74c61accb7010a4e7aee33"
uuid = "fdea26ae-647d-5447-a871-4b548cad5224"
version = "3.5.0"
version = "3.6.0"

[[deps.SIMDTypes]]
git-tree-sha1 = "330289636fb8107c5f32088d2741e9fd7a061a5c"
Expand All @@ -1920,9 +1918,9 @@ version = "0.1.0"

[[deps.SciMLBase]]
deps = ["ADTypes", "Accessors", "ArrayInterface", "CommonSolve", "ConstructionBase", "Distributed", "DocStringExtensions", "EnumX", "Expronicon", "FunctionWrappersWrappers", "IteratorInterfaceExtensions", "LinearAlgebra", "Logging", "Markdown", "PrecompileTools", "Preferences", "Printf", "RecipesBase", "RecursiveArrayTools", "Reexport", "RuntimeGeneratedFunctions", "SciMLOperators", "SciMLStructures", "StaticArraysCore", "Statistics", "SymbolicIndexingInterface", "Tables"]
git-tree-sha1 = "c96f81c3e98d5e2f0848fb42aba4383d772c3bb7"
git-tree-sha1 = "71857d6bab17e7ac6802d86ffcc75423b8c1d812"
uuid = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
version = "2.53.1"
version = "2.54.0"

[deps.SciMLBase.extensions]
SciMLBaseChainRulesCoreExt = "ChainRulesCore"
Expand Down Expand Up @@ -2119,9 +2117,9 @@ version = "0.3.7"

[[deps.StringManipulation]]
deps = ["PrecompileTools"]
git-tree-sha1 = "a04cabe79c5f01f4d723cc6704070ada0b9d46d5"
git-tree-sha1 = "a6b1675a536c5ad1a60e5a5153e1fee12eb146e3"
uuid = "892a3eda-7b42-436c-8928-eab12a02cf0e"
version = "0.3.4"
version = "0.4.0"

[[deps.StructArrays]]
deps = ["ConstructionBase", "DataAPI", "Tables"]
Expand Down Expand Up @@ -2153,19 +2151,19 @@ version = "7.2.1+1"

[[deps.SurfaceFluxes]]
deps = ["DocStringExtensions", "RootSolvers", "Thermodynamics"]
git-tree-sha1 = "89c701c87f378ce95e7ddbcd69b8f1106ba8b968"
git-tree-sha1 = "aee530bde85cd41374273568cb649e72d82921e7"
uuid = "49b00bb7-8bd4-4f2b-b78c-51cd0450215f"
version = "0.11.0"
version = "0.12.0"
weakdeps = ["ClimaParams"]

[deps.SurfaceFluxes.extensions]
CreateParametersExt = "ClimaParams"

[[deps.SymbolicIndexingInterface]]
deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"]
git-tree-sha1 = "988e04b34a4c3b824fb656f542473df99a4f610d"
git-tree-sha1 = "0225f7c62f5f78db35aae6abb2e5cabe38ce578f"
uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5"
version = "0.3.30"
version = "0.3.31"

[[deps.TOML]]
deps = ["Dates"]
Expand Down Expand Up @@ -2422,9 +2420,9 @@ version = "1.2.13+1"

[[deps.Zstd_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "e678132f07ddb5bfa46857f0d7620fb9be675d3b"
git-tree-sha1 = "555d1076590a6cc2fdee2ef1469451f872d8b41b"
uuid = "3161d3a3-bdf6-5164-811a-617609db77b4"
version = "1.5.6+0"
version = "1.5.6+1"

[[deps.isoband_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
Expand Down
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