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Adding regions file to WES mk_examples command to speed up run time tests #255: Commit ea59355 pushed by skchronicles
November 14, 2024 18:51 57s main
main
November 14, 2024 18:51 57s
Adding clairS-to regions option tests #254: Commit ebca284 pushed by skchronicles
November 13, 2024 22:33 59s main
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November 13, 2024 22:33 59s
Adding new --use-gpus option and adding support for deepsomatic with … tests #253: Commit 1be576d pushed by skchronicles
November 12, 2024 23:22 58s main
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November 12, 2024 23:22 58s
Adding allocation information for new deepsomatic rules tests #252: Commit 1267ed4 pushed by skchronicles
November 12, 2024 22:49 54s main
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November 12, 2024 22:49 54s
Breaking up deepsomatic into its constituent steps tests #251: Commit 57b666c pushed by skchronicles
November 5, 2024 20:25 58s main
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November 5, 2024 20:25 58s
Decreasing lscratch allocation information for deepsomatic tests #250: Commit d145b39 pushed by skchronicles
November 1, 2024 20:18 58s main
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November 1, 2024 20:18 58s
Exporting OpenBLAS thread pool variable prior to running deepsomatic tests #249: Commit b407512 pushed by skchronicles
October 31, 2024 18:59 54s main
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October 31, 2024 18:59 54s
Removing --contamination-table from FilterMutectCalls due to causing … tests #248: Commit 613d69e pushed by skchronicles
October 30, 2024 20:47 54s main
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October 30, 2024 20:47 54s
Bumping up clairs-to allocated memory and providing half of allocted … tests #247: Commit 3d06f7d pushed by skchronicles
October 28, 2024 17:04 1m 4s main
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October 28, 2024 17:04 1m 4s
Removing extra octopus filter that results in lower recall tests #246: Commit 288c45c pushed by skchronicles
October 25, 2024 15:17 1m 4s main
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October 25, 2024 15:17 1m 4s
Bumping up deepsomatic local disk allocation tests #245: Commit 9f1c3ff pushed by skchronicles
October 23, 2024 02:17 58s main
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October 23, 2024 02:17 58s
Adding new docker image with bwa-mem2 wrapper tests #244: Commit 0925a6f pushed by skchronicles
October 21, 2024 20:09 59s main
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October 21, 2024 20:09 59s
Updating adding bwa-mem2 wrapper and increasing patch version tests #243: Commit e4aadb3 pushed by skchronicles
October 21, 2024 18:17 55s main
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October 21, 2024 18:17 55s
Adding wrapper to select the correct bwa-mem2 pre-compiled binary for… tests #242: Commit ee21c9a pushed by skchronicles
October 21, 2024 17:51 58s main
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October 21, 2024 17:51 58s
Adding deepsomatic variant caller for WGS TN-pairs tests #241: Commit 1a8a20b pushed by skchronicles
October 18, 2024 22:01 54s main
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October 18, 2024 22:01 54s
Adding clairS-TO somatic variant caller tests #240: Commit efbc080 pushed by skchronicles
September 26, 2024 21:36 1m 1s main
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September 26, 2024 21:36 1m 1s
Bumping up jvm memory to 32/64 based on docs recomendations tests #239: Commit 8e79479 pushed by skchronicles
September 26, 2024 15:00 55s main
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September 26, 2024 15:00 55s
Adding refs and rule for hmftools sage tests #238: Commit 21118eb pushed by skchronicles
September 25, 2024 21:19 52s main
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September 25, 2024 21:19 52s
pages build and deployment pages-build-deployment #22: by github-pages bot
July 1, 2024 19:26 23s
July 1, 2024 19:26 23s
Chore: Adding citation to documentation docs #22: Commit 16edd8a pushed by skchronicles
July 1, 2024 19:26 39s main
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July 1, 2024 19:26 39s
Chore: Adding citation to documentation tests #237: Commit 16edd8a pushed by skchronicles
July 1, 2024 19:26 1m 2s main
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July 1, 2024 19:26 1m 2s
Chore: Adding Zenodo DOI, citation, and other badges. tests #236: Commit 36ca544 pushed by skchronicles
June 28, 2024 20:51 53s main
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June 28, 2024 20:51 53s
pages build and deployment pages-build-deployment #21: by github-pages bot
June 28, 2024 18:43 23s
June 28, 2024 18:43 23s
Adding step to check and enforce a maximum snakemake version docs #21: Commit c5f181c pushed by skchronicles
June 28, 2024 18:43 44s v0.9.0
v0.9.0
June 28, 2024 18:43 44s
pages build and deployment pages-build-deployment #20: by github-pages bot
June 28, 2024 18:39 24s
June 28, 2024 18:39 24s