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Adding check on epiworldR #506

Adding check on epiworldR

Adding check on epiworldR #506

Workflow file for this run

# This workflow uses actions that are not certified by GitHub.
# They are provided by a third-party and are governed by
# separate terms of service, privacy policy, and support
# documentation.
#
# See https://github.com/r-lib/actions/tree/master/examples#readme for
# additional example workflows available for the R community.
name: Tests
on:
push:
branches: [ master ]
pull_request:
jobs:
test-macos:
runs-on: macos-latest
steps:
- uses: actions/checkout@v4
- name: Check
run: |
brew install llvm@14
echo 'export PATH="/usr/local/opt/llvm@14/bin:$PATH"' >> /Users/runner/.bash_profile
cd tests && make main.a && ./main.a
test-macos-clang18:
runs-on: macos-latest
steps:
- uses: actions/checkout@v4
- name: Check
run: |
brew install llvm@18
echo 'export PATH="/usr/local/opt/llvm@18/bin:$PATH"' >> /Users/runner/.bash_profile
cd tests && make main.a && ./main.a
test-ubuntu:
runs-on: ubuntu-latest
container: gvegayon/epiworld:latest
steps:
- uses: actions/checkout@v4
- name: Check
env:
OPENMP: -fopenmp
run: |
cd tests
make main.o
./main.o
test-epiworld-r:
runs-on: ubuntu-latest
container: rocker/r2u:latest
steps:
- uses: actions/checkout@v4
- uses: actions/checkout@v4
with:
repository: UofUEpiBio/epiworldR
path: ./r-pkg
- name: Getting epiworldR
run: |
install2.r knitr rmarkdown tinytest netplot igraph data.table
apt-get update && apt-get install -y --no-install-recommends pandoc
cp -r include/epiworld/ r-pkg/inst/include/epiworld/
R CMD build r-pkg
R CMD check epiworldR_*.tar.gz