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COMP: Ignore warnings from third party code #266

COMP: Ignore warnings from third party code

COMP: Ignore warnings from third party code #266

name: Build, test, package
on: [push,pull_request]
env:
itk-git-tag: "v5.4rc01"
itk-wheel-tag: "v5.4rc01"
ITKPythonPackage-git-tag: "5ad02309321621cdc7269b9b68a35013c912271c"
ctest-options: ""
jobs:
build-test-cxx:
runs-on: ${{ matrix.os }}
strategy:
max-parallel: 3
matrix:
os: [ubuntu-22.04, windows-2022, macos-12]
include:
- os: ubuntu-22.04
c-compiler: "gcc"
cxx-compiler: "g++"
cmake-build-type: "MinSizeRel"
- os: windows-2022
c-compiler: "cl.exe"
cxx-compiler: "cl.exe"
cmake-build-type: "Release"
- os: macos-12
c-compiler: "clang"
cxx-compiler: "clang++"
cmake-build-type: "MinSizeRel"
steps:
- uses: actions/checkout@v3
- name: 'Specific XCode version'
if: matrix.os == 'macos-12'
run: |
sudo xcode-select -s "/Applications/Xcode_13.2.1.app"
- name: Set up Python 3.9
uses: actions/setup-python@v4
with:
python-version: "3.9"
- uses: shogo82148/actions-setup-perl@v1
- uses: ilammy/setup-nasm@v1
- name: Get specific version of CMake, Ninja
uses: lukka/[email protected]
- name: Download ITK
run: |
cd ..
git clone https://github.com/InsightSoftwareConsortium/ITK.git
cd ITK
git checkout ${{ env.itk-git-tag }}
- name: Build ITK
if: matrix.os != 'windows-2022'
run: |
cd ..
mkdir ITK-build
cd ITK-build
cmake -DCMAKE_C_COMPILER:FILEPATH="${{ matrix.c-compiler }}" -DBUILD_SHARED_LIBS:BOOL=ON -DCMAKE_CXX_COMPILER="${{ matrix.cxx-compiler }}" -DCMAKE_BUILD_TYPE:STRING=${{ matrix.cmake-build-type }} -DBUILD_TESTING:BOOL=OFF -GNinja ../ITK
ninja
- name: Build ITK
if: matrix.os == 'windows-2022'
run: |
cd ..
mkdir ITK-build
cd ITK-build
call "C:\Program Files\Microsoft Visual Studio\2022\Enterprise\VC\Auxiliary\Build\vcvars64.bat"
cmake -DCMAKE_C_COMPILER:FILEPATH="${{ matrix.c-compiler }}" -DBUILD_SHARED_LIBS:BOOL=ON -DCMAKE_CXX_COMPILER="${{ matrix.cxx-compiler }}" -DCMAKE_BUILD_TYPE:STRING=${{ matrix.cmake-build-type }} -DBUILD_TESTING:BOOL=OFF -GNinja ../ITK
ninja
shell: cmd
- name: Fetch CTest driver script
run: |
curl -L https://raw.githubusercontent.com/InsightSoftwareConsortium/ITK/dashboard/itk_common.cmake -O
- name: Configure CTest script
shell: bash
run: |
operating_system="${{ matrix.os }}"
cat > dashboard.cmake << EOF
set(CTEST_SITE "GitHubActions")
file(TO_CMAKE_PATH "\$ENV{GITHUB_WORKSPACE}/.." CTEST_DASHBOARD_ROOT)
file(TO_CMAKE_PATH "\$ENV{GITHUB_WORKSPACE}/" CTEST_SOURCE_DIRECTORY)
file(TO_CMAKE_PATH "\$ENV{GITHUB_WORKSPACE}/../build" CTEST_BINARY_DIRECTORY)
set(dashboard_source_name "${GITHUB_REPOSITORY}")
if(ENV{GITHUB_REF} MATCHES "master")
set(branch "-master")
set(dashboard_model "Continuous")
else()
set(branch "-${GITHUB_REF}")
set(dashboard_model "Experimental")
endif()
set(CTEST_BUILD_NAME "${GITHUB_REPOSITORY}-${operating_system}-\${branch}")
set(CTEST_UPDATE_VERSION_ONLY 1)
set(CTEST_TEST_ARGS \${CTEST_TEST_ARGS} PARALLEL_LEVEL \${PARALLEL_LEVEL})
set(CTEST_BUILD_CONFIGURATION "Release")
set(CTEST_CMAKE_GENERATOR "Ninja")
set(CTEST_CUSTOM_WARNING_EXCEPTION
\${CTEST_CUSTOM_WARNING_EXCEPTION}
# macOS Azure VM Warning
"ld: warning: text-based stub file"
"Wunused-result"
"file: .+ has no symbols"
"Wpointer-bool-conversion"
"note: prefix with the address-of operator to silence this warning"
"warning C4722: 'riegeli::internal::UnreachableStream::~UnreachableStream': destructor never returns, potential memory leak"
"warning C4722: 'riegeli::internal::CheckFailed::~CheckFailed': destructor never returns, potential memory leak"
"_deps[/\\\\].+-src[/\\\\]" # disable all warnings from external projects
"_deps[/\\\\].+-build[/\\\\]" # disable all warnings from external projects
# the following warnings escape the above filter
"warning: Import validate/validate.proto is unused"
"warning:.+__builtin___memcpy_chk"
"warning:.+__builtin_memchr"
"warning:.+__builtin_memcpy"
"cc1plus: warning: writing 16 bytes into a region of size 0"
"note: source object allocated here"
)
set(dashboard_no_clean 1)
set(ENV{CC} ${{ matrix.c-compiler }})
set(ENV{CXX} ${{ matrix.cxx-compiler }})
if(WIN32)
set(ENV{PATH} "\${CTEST_DASHBOARD_ROOT}/ITK-build/bin;\$ENV{PATH}")
endif()
set(dashboard_cache "
ITK_DIR:PATH=\${CTEST_DASHBOARD_ROOT}/ITK-build
BUILD_TESTING:BOOL=ON
")
string(TIMESTAMP build_date "%Y-%m-%d")
message("CDash Build Identifier: \${build_date} \${CTEST_BUILD_NAME}")
message("CTEST_SITE = \${CTEST_SITE}")
include(\${CTEST_SCRIPT_DIRECTORY}/itk_common.cmake)
EOF
cat dashboard.cmake
- name: Build and test
if: matrix.os != 'windows-2022'
run: |
ctest --output-on-failure -j 2 -V -S dashboard.cmake ${{ env.ctest-options }}
- name: Build and test
if: matrix.os == 'windows-2022'
run: |
call "C:\Program Files\Microsoft Visual Studio\2022\Enterprise\VC\Auxiliary\Build\vcvars64.bat"
ctest --output-on-failure -j 2 -V -S dashboard.cmake ${{ env.ctest-options }}
shell: cmd
build-linux-py:
runs-on: ubuntu-22.04
strategy:
max-parallel: 2
matrix:
python-version: ["38", "39", "310", "311"]
steps:
- uses: actions/checkout@v3
- name: 'Fetch build script'
run: |
curl -L https://raw.githubusercontent.com/InsightSoftwareConsortium/ITKPythonPackage/${{ env.ITKPythonPackage-git-tag }}/scripts/dockcross-manylinux-download-cache-and-build-module-wheels.sh -O
chmod u+x dockcross-manylinux-download-cache-and-build-module-wheels.sh
- name: 'Build 🐍 Python πŸ“¦ package'
run: |
export ITK_PACKAGE_VERSION=${{ env.itk-wheel-tag }}
export ITKPYTHONPACKAGE_TAG=${{ env.ITKPythonPackage-git-tag }}
export MANYLINUX_VERSION="_2_28"
echo "Building for manylinux specialization ${MANYLINUX_VERSION}"
pwd
./dockcross-manylinux-download-cache-and-build-module-wheels.sh cp${{ matrix.python-version }}
- name: Publish Python package as GitHub Artifact
uses: actions/upload-artifact@v3
with:
name: LinuxWheel${{ matrix.python-version }}
path: dist/*.whl
build-macos-py:
runs-on: macos-12
strategy:
max-parallel: 2
matrix:
python-version: ["3.8", "3.9", "3.10", "3.11"]
steps:
- uses: actions/checkout@v3
- name: 'Specific XCode version'
run: |
sudo xcode-select -s "/Applications/Xcode_13.2.1.app"
- name: Get specific version of CMake, Ninja
uses: lukka/[email protected]
- uses: shogo82148/actions-setup-perl@v1
- uses: ilammy/setup-nasm@v1
- name: 'Fetch build script'
run: |
curl -L https://raw.githubusercontent.com/InsightSoftwareConsortium/ITKPythonPackage/${{ env.ITKPythonPackage-git-tag }}/scripts/macpython-download-cache-and-build-module-wheels.sh -O
chmod u+x macpython-download-cache-and-build-module-wheels.sh
- name: 'Build 🐍 Python πŸ“¦ package'
run: |
export ITK_PACKAGE_VERSION=${{ env.itk-wheel-tag }}
export ITKPYTHONPACKAGE_TAG=${{ env.ITKPythonPackage-git-tag }}
export MACOSX_DEPLOYMENT_TARGET=10.15
pwd
./macpython-download-cache-and-build-module-wheels.sh "${{ matrix.python-version }}"
- name: Set up Python 3.10
uses: actions/setup-python@v4
with:
python-version: "3.10"
- name: Validate build output
shell: bash
run: |
python -m pip install twine
ls dist/
WHEEL_PATTERN="dist/itk_*macosx*.whl"
EXPECTED_WHEEL_COUNT=1
WHEEL_COUNT=`(ls ${WHEEL_PATTERN} | wc -l)`
if (( ${WHEEL_COUNT} != ${EXPECTED_WHEEL_COUNT} )); then
echo "Expected ${EXPECTED_WHEEL_COUNT} wheels but found ${WHEEL_COUNT}"
exit 1
fi
python -m twine check ${WHEEL_PATTERN}
- name: Publish Python package as GitHub Artifact
uses: actions/upload-artifact@v3
with:
name: MacOSWheels
path: dist/*.whl
build-windows-py:
runs-on: windows-2022
strategy:
max-parallel: 2
matrix:
python-version-minor: ["8", "9", "10", "11"]
steps:
- name: Get specific version of CMake, Ninja
uses: lukka/[email protected]
- uses: actions/checkout@v3
with:
path: "im"
- name: 'Reduce source path length'
shell: bash
run: |
# Move checked-out source to a shorter path to avoid Windows path length issues
mv im ../../
- name: 'Install Python'
run: |
$pythonArch = "64"
$pythonVersion = "3.${{ matrix.python-version-minor }}"
iex ((new-object net.webclient).DownloadString('https://raw.githubusercontent.com/scikit-build/scikit-ci-addons/master/windows/install-python.ps1'))
- uses: shogo82148/actions-setup-perl@v1
- uses: ilammy/setup-nasm@v1
- name: 'Fetch build dependencies'
shell: bash
run: |
cd ../../im
curl -L "https://github.com/InsightSoftwareConsortium/ITKPythonBuilds/releases/download/${{ env.itk-wheel-tag }}/ITKPythonBuilds-windows.zip" -o "ITKPythonBuilds-windows.zip"
7z x ITKPythonBuilds-windows.zip -o/c/P -aoa -r
curl -L "https://data.kitware.com/api/v1/file/5c0ad59d8d777f2179dd3e9c/download" -o "doxygen-1.8.11.windows.bin.zip"
7z x doxygen-1.8.11.windows.bin.zip -o/c/P/doxygen -aoa -r
curl -L "https://data.kitware.com/api/v1/file/5bbf87ba8d777f06b91f27d6/download/grep-win.zip" -o "grep-win.zip"
7z x grep-win.zip -o/c/P/grep -aoa -r
if [[ -n ${{ env.ITKPythonPackage-git-tag }} ]]; then
echo "Updating ITKPythonPackage build scripts to ${{ env.ITKPythonPackage-git-tag }}"
pushd /c/P/IPP
git remote add InsightSoftwareConsortium https://github.com/InsightSoftwareConsortium/ITKPythonPackage.git --tags
git fetch InsightSoftwareConsortium
git checkout ${{ env.ITKPythonPackage-git-tag }}
git status
popd
else
echo "Using ITKPythonPackage scripts included with ITKPythonBuilds archive"
fi
- name: 'Build 🐍 Python πŸ“¦ package'
shell: cmd
run: |
cd ../../im
call "C:\Program Files\Microsoft Visual Studio\2022\Enterprise\VC\Auxiliary\Build\vcvars64.bat"
set PATH=C:\P\grep;%PATH%
set CC=cl.exe
set CXX=cl.exe
pwd
C:\Python3${{ matrix.python-version-minor }}-x64\python.exe C:\P\IPP\scripts\windows_build_module_wheels.py --py-envs "3${{ matrix.python-version-minor }}-x64" --no-cleanup
mkdir ${{ github.workspace }}\dist
copy dist\*.whl ${{ github.workspace }}\dist
- name: Publish Python package as GitHub Artifact
uses: actions/upload-artifact@v3
with:
name: WindowsWheel3.${{ matrix.python-version-minor }}
path: dist/*.whl
publish-python-packages-to-pypi:
needs:
- build-linux-py
- build-macos-py
- build-windows-py
runs-on: ubuntu-22.04
steps:
- name: Download Python Packages
uses: actions/download-artifact@v3
- name: Prepare packages for upload
run: |
ls -R
for d in */; do
mv ${d}/*.whl .
done
mkdir dist
mv *.whl dist/
ls dist
- name: Publish 🐍 Python πŸ“¦ package to PyPI
if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags')
uses: pypa/gh-action-pypi-publish@master
with:
user: __token__
password: ${{ secrets.pypi_password }}