Analyze the package with RcppDeepState

[FabrizioSandri]

This PR adds a new Github Action which runs RcppDeepState+valgrind on your package. That means the C++ functions of your package will be tested with random inputs, and there will be a comment like this one for each new PR (which reports if valgrind found any issues with random inputs).

RcppDeepState Analysis

This package contains problems, according to RcppDeepState. The report was generated by RcppDeepState-action in this repository's fork and is accessible here.

[FabrizioSandri]

RcppDeepState Report

function name	message	file line	address trace	R code
find_discords_brute_force	Invalid read of size 1	visit_registry.cpp:54	No Address Trace found	Test code testlist <- list(discords_num = -1060532665L, ts = c(-Inf, NA), w_size = 966236145L) result <- do.call(jmotif:::find_discords_brute_force, testlist)
find_discords_hotsax	Invalid read of size 8	hot-sax.cpp:163	hot-sax.cpp:163	Test code testlist <- list(a_size = -1133788262L, discords_num = -973403020L, n_threshold = 6.82052220002715e+301, paa_size = -216643676L, ts = c(-4.40168706388367e-299, -6.81011367816273e+58, -1.74596123671089e-62, 2.35664674891128e+103, -7.34676839219453e-204, 18246.6722211775, 2.12486428515207e-297, -3.65415818647277e+149, 3.04878044954172e-176, -9.3092813898844e+32, -1.08681412918405e-244, -1.76825679541207e-258, 3.69072600854281e+41, -2.66161261167014e+163, -7.80881697492692e-125, 4.1200416537432e-104, -7.24708871550165e+283, -9.51261354548949e-18, -1.70910301628978e+144, -8.61427134315865e+142, 1.51637923939648e+58, 2.38322787935977e-29, -1621.46653920929, -1.31866644798172e+82, -2574799950292324864, -1.98714902228073e-264, 2.62129759791053e+178, 2.19206573058837e-300, 2.56108371216421e+161, -2.51514340459804e+116, -4.63597112261019e-306, 4.61749967202817e+251, -3.32598758252959e-123, -3.35199850752755e-244, -1.60077301245421e-46 ), w_size = 1255466451L) result <- do.call(jmotif:::find_discords_hotsax, testlist)
find_discords_rra	62 bytes in 1 blocks are possibly lost in loss record 20 of 1,299	rra.cpp:326	No Address Trace found	Test code testlist <- list(a_size = -1484187319L, discords_num = -439423508L, n_threshold = 1.06799009430505e-130, nr_strategy = c("bsqcfclmwpsicmevylae", "yuikiturqqoytywbtqcy", "znsdfrdamgiispwwumur", "sjidsuxqtnaaplrxbsxe", "pnahlifqmfgh", NA, NA, NA, "cdlyvptuxijwrbmmfela", "mvzjldejlipyxnfqjrea", "bleqrmvujoezmbqddvkn", "fm", NA, "iguayifojqzpsdukqolw", NA, NA, "wmrmpienkmzbtojzogni", "onbbgmotlwssh", "imodru", NA, NA, "jhsjbjhbhfznqslcbahq", "szqfcvnwfzoyzfcwtnna", "rppnoizmmfejjtmwvkyr", "wbarjvkhofiiascbsvkf"), paa_size = 1979806750L, series = c(4.35311503303897e-253, 1.73232154533617e+225, 9.18832269000572e+210, 1.52824370602564e-241, -1.55944399025452e+302, -4.1810728351886e+122, -2.6693751949625e-45, 4.13215887904925e+265, 2.25517775695754e+101, 3.07861848126594e-147, 6.11166944232844e-129, -1.05993128062056e+141, 7.8704852130192e+245, 6.81233859191571e-221, 4.47157378505948e-76, -1.63052396296785e-178, 1.81143795990472e-289, -6.92822222178914e+31, NaN, 7.95959050815145e-203, -3.80285385092954e+296, -Inf, -6.23311622525382e+264, NaN, -1.57164815556968e+159, -3.34118828952537e-217, 1.67084034093978e-121, -8.13314998465459e+307, -9.70117390177528e+84, Inf, 2.68383905269473e-52, -7.47645941271375e-47, -1.45453848187852e-11, -2.30161272772341e+73, 0), w_size = 1294386236L) result <- do.call(jmotif:::find_discords_rra, testlist)
idx_to_letter	Invalid read of size 1	string.cpp:17	No Address Trace found	Test code testlist <- list(idx = -609900322L) result <- do.call(jmotif:::idx_to_letter, testlist)
is_equal_mindist	62 bytes in 1 blocks are possibly lost in loss record 20 of 1,301	string.cpp:77	No Address Trace found	Test code testlist <- list(a = c(NA, NA, "xdmkgbnwvjuzxia", "qggsawmndyeslj", "fmohntsnwwri", NA, "", "v", "ropxohtudsvwmzhycnjb", NA, "xtovprfnntrj", NA, "flcfrrbubtptlxkdeuzg", NA, "ypwhksiemhvatjrikcky", "mxlktimbpmcacybjqsgc", "winmukaexkjwkfsjdkxg", "olcecbcratzbxkvvpiqc", "pxgnatsankw", "zxqcjhfjbvtitbanmejs", NA, NA, "hiegagtlazseokheahsk", "ljinhtgqfqjtpjhgyycc", NA, "mxjsdq", "izvzfzmeowrxz", NA, "ldigofahfowrmxjyyhcr", "typheikteuhyvk", "hdwugqgjncby"), b = c("tfknvruhqgxugmorlwep", "ozgirs", "ayszdwebieaapsmaqzai", NA, "ktmsnembknwsuiypzdoc", NA, "araoguc", "lvybnbcqfquoqysdtwdg", "hnlixlleqakdylemnfwc", "higst", "vxztjprcormuvzqnl", NA, "hxzgtq", "xssvirutokrseqffyi", "h", "jv", "jxikogtaoaxz", "vxhmehxfejdpkpygywip", NA, "kweg", "itk", "zptkqodaedpkladmo", "nv", "vtubhetvmewqdkabxorp", NA, "fwlbvnzialormmcscukk", "xn", NA, "blrdmfihdxxmywhivzx", "tzxexfnpbchnveca", "scxzoxpviynhzqzllrse", "olxykrznkoveaeqdiqku", "uglzonvjyulnnfvgs", NA, NA, NA, NA, "glfufxdwszzkgmvxhaak", "vpcrgrhxo", NA, "gmpzedkzsurehtqdc", "uttewqxgvmimvypwtt", NA, "jpzj", "cpu", "kxztzpfvwzcxtcdzorob", NA, "xjrsv", "zymwhuhtdgkksjochtfn", "tcwkolslwxmznfl", "yaadqjdjcniverzvpfnx", "filcpnp")) result <- do.call(jmotif:::is_equal_mindist, testlist)
is_equal_str	62 bytes in 1 blocks are possibly lost in loss record 20 of 1,301	string.cpp:60	No Address Trace found	Test code testlist <- list(a = c(NA, NA, "xdmkgbnwvjuzxia", "qggsawmndyeslj", "fmohntsnwwri", NA, "", "v", "ropxohtudsvwmzhycnjb", NA, "xtovprfnntrj", NA, "flcfrrbubtptlxkdeuzg", NA, "ypwhksiemhvatjrikcky", "mxlktimbpmcacybjqsgc", "winmukaexkjwkfsjdkxg", "olcecbcratzbxkvvpiqc", "pxgnatsankw", "zxqcjhfjbvtitbanmejs", NA, NA, "hiegagtlazseokheahsk", "ljinhtgqfqjtpjhgyycc", NA, "mxjsdq", "izvzfzmeowrxz", NA, "ldigofahfowrmxjyyhcr", "typheikteuhyvk", "hdwugqgjncby"), b = c("tfknvruhqgxugmorlwep", "ozgirs", "ayszdwebieaapsmaqzai", NA, "ktmsnembknwsuiypzdoc", NA, "araoguc", "lvybnbcqfquoqysdtwdg", "hnlixlleqakdylemnfwc", "higst", "vxztjprcormuvzqnl", NA, "hxzgtq", "xssvirutokrseqffyi", "h", "jv", "jxikogtaoaxz", "vxhmehxfejdpkpygywip", NA, "kweg", "itk", "zptkqodaedpkladmo", "nv", "vtubhetvmewqdkabxorp", NA, "fwlbvnzialormmcscukk", "xn", NA, "blrdmfihdxxmywhivzx", "tzxexfnpbchnveca", "scxzoxpviynhzqzllrse", "olxykrznkoveaeqdiqku", "uglzonvjyulnnfvgs", NA, NA, NA, NA, "glfufxdwszzkgmvxhaak", "vpcrgrhxo", NA, "gmpzedkzsurehtqdc", "uttewqxgvmimvypwtt", NA, "jpzj", "cpu", "kxztzpfvwzcxtcdzorob", NA, "xjrsv", "zymwhuhtdgkksjochtfn", "tcwkolslwxmznfl", "yaadqjdjcniverzvpfnx", "filcpnp")) result <- do.call(jmotif:::is_equal_str, testlist)
manyseries_to_wordbag	62 bytes in 1 blocks are possibly lost in loss record 20 of 1,299	sax-vsm.cpp:86	No Address Trace found	Test code testlist <- list(a_size = 1487393735L, data = structure(c(3.38589826732686e+250, 1.20890913739657e-48, 7.34545276921348e-33, 8.13591288016893e-26, 1.15190525193524e+63, 3.68941849270307e+120, 3.29411726139608e-249, 1.88890586700697e-264, 6.13946242213266e+116, 1.5587883344527e-205, NaN, 5.89764006340363e-186, -Inf, 1.02458072888723e-158, 9.27521152339122e-223, 8.6029347915735e-183, 1.49953405558559e-151, 4.78045833541111e+42, 1.42994917572854e-123, 7.66970373073798e-41, 5.03454160196298e+219, 9.54594277912556e-52, 3.74299395647307e+93, 2.39314350837956e-24, NaN, 1.48416290413573e+135, 1.52311122102347e-251, 246.848687416845, 1.81658606591124e-67, 8.3087694103941e-24, 4.01935759801793e-38, 3.32348927402275e-230, Inf, 1.09058525120583e-100, 2.24119878209728e-74, 45679065.788357), .Dim = c(4L, 9L)), n_threshold = 3.82255275937833e-90, nr_strategy = c("gvalonj", "smxwvqmjdn", "ybrhweniuhfvowblcvnl", NA, "apsmslhbraafl", "vxygepqbqcfxmlpdtwnk", "ts", "", "iyvndjvsfrbsxnmjfhmi", NA, "afyegcnvkpkhgldec", "dooxilxjrcgypzdvdqgb", "", "cokwpavuuohlmqlimrub", "bqkzytybdmeohbeoogq", "lqcdbxkpyehkttehfrxb", "xy", NA, NA, "", "bpdiuafsyjltwgkeg", "dzcuqwanhnyywlqlbeip", "hgmauaixtutfqkryxjrk", NA, NA, "riemzsmbcwnchnbolnak", "yrlcgjykrjkdhnkpecua", NA ), paa_size = -689818054L, w_size = 788788698L) result <- do.call(jmotif:::manyseries_to_wordbag, testlist)
paa	73 bytes in 1 blocks are possibly lost in loss record 23 of 1,298	paa.cpp:98	No Address Trace found	Test code testlist <- list(paa_num = -1921877987L, ts = c(-1.08601625427423e+29, 4.66921492101986e+235, 4.65379421460512e-159, 3.01409552264855e-266, 1.82230383021177e+46, -1.90092668933469e-228, -226469701.968652, -3.87559163775563e-130, -7.21268728857414e-155, 2.32294776002041e+82, 1.30273922919829e+123, -3.24695860313734e-270, 3.14188366245367e+139, -1.1436980507663e-107, -2.72973052237448e+304, 2.31795398029849e-239, -2.05871348560586e+185, -1.24457347469696e+221, -4.07393992207637e+220, 3.53661317237817e-191, -6.27900287964226e+184, 2.09368930096221e+28, -24.743672073476, -2.59815760840042e+194, -1.72729787728358e+34, 1.95854400190789e-86, -1.64875434279819e-57, -2.00885266595529e+182, -1.68868817395482e+214, -3.61616534489085e-215, 1.22443496541187e+42, 3.60802262218022e+221, 6.99429041017613e-07)) result <- do.call(jmotif:::paa, testlist)
sax_by_chunking	73 bytes in 1 blocks are possibly lost in loss record 23 of 1,298	paa.cpp:98	No Address Trace found	Test code testlist <- list(a_size = -1783070820L, n_threshold = -2.50066782912961e+99, paa_size = -299529119L, ts = c(-5.98363036950773e-227, -1.19880898533901e+242, -1.13294782653951e+145, -2.17410975629619e-55, -3.10299318806034e+225, 4.34331851764076e+68, -2.21361257048244e-63, -2.38015218451453e-200, -4.67282764921602e+80, 2.51640476161112e-119, 2.01315904685142e+292, -2.93014886059429e+247, 1.04199701323152e+183, 1.12539894095025e+67, 3.43802366793046e+275, 8.44134379622743e-23, 9.98669286144375e+219, -1.0455885485337e+115, -5.08408608362261e+268, 8.64585306045226e-273, 6.363755135566e+147, -2.00911052484833e+31, -7.95450640287254e-171, 3.30762869999367e+246, 9.22804029384491e-210, -1.19711679163567e+128, -1.40869293351568e+242, 1.79378704703541e+165, 3.09664316446208e-83, -5.96235975621467e-162, 6.91001103574737e-62, -4.20101798395003e+222, 3.35520494194456e+31, -2.18287413704879e+150, 98153177.040395, -2.1344800437317e+265, 3.49887347894649e-198, 1.15887952796032e+255, 2.46928256230429e-163, 3.44244737793938e+23, -3.09357403115793e+275, -2.82333675067637e-148)) result <- do.call(jmotif:::sax_by_chunking, testlist)
sax_via_window	62 bytes in 1 blocks are possibly lost in loss record 20 of 1,299	string.cpp:61	No Address Trace found	Test code testlist <- list(a_size = 77314278L, n_threshold = 1.03791224547657e-279, nr_strategy = c(NA, "skeoubeovxrnlcqp", "ekexfkefqppbtkwklrpp", NA, "cyjywarehiyvcopnsnpo", "xhboovrs", "btxszykhowcjbsmcjfrf", "nghzbqaiounmtvqewjjv", NA, NA, "wcicexniy", "esokwasb", "uv", "pqeadqxkjfdnc", "t", NA, "lcmcngcmvvgsrvoxzugd", "gnmfeljlwqb", NA, "pbtqckncywddgqlcjjch", NA, NA, NA, "sccpzdytrucbfpvpdvpb", "vasyamnghglokiwuhctz", "sailmjsvvmftrgjcbpih", NA, "typjvwbnsahvgfcotbkh", NA, "", "iphzzymqnyxkznclxysh", "fszdiipwowddaxxrirhu", NA, "sbmpklmwhijkkuyexlkl", "hdztnvbbocsfkfqywlvg", "jghpzayotbysuelkeeue", "mdbtoxtjhtdclemryjxv", NA, NA, NA, "zknrdsnxijjx", "draeppzbtgnixvdgsvms", "ske", NA, "vqvbxbuocpoqlwocjqmm", NA, "fkachbvuysokoqfc", "hwzmzrfabnhupsadiqib", NA, NA, "hkqyiisehcbxugtmhqoh", NA, "uztncynfxckvwulnwlqq", "p", NA, "erbjqhsnfhqdnlbxsgss", "ufdbkpqcrhpznduhbgha", "a", "qvudwglqacvqpfmqrijx", "lxcqsmjycbdlavitlnde", "dwcbojewwujtndjvmtl", "ekydfpgstjoauizvebgi", "diimyq", "ixrjhblqlokoiy", NA, NA, "nfyisahjlhjfrh", "rfiutpwtgsatofsponib" ), paa_size = -1287526675L, ts = c(-6.45434794495422e-269, 6.72672283737528e-267, -1.02124486998706e-120, 4.05431857508005e+60, 2.95091562413324e+263, -1.45133819115277e+49, -82409851.1570325, 3.49751718907396e-108, -3.67964474202813e-207, 6100.12862689899, 2.80203688994811e-71, NA, NaN, -7.54697322665086e+122, -1.06800079725266e-256, -2.36990231096439e-55, 1.61481951459153e-81, -7.28100240278858e-203, -4.56570462327401e+117, Inf, -1.05830689192988e-132, 1.19510697426011e-85, -1.22520586987551e-34, Inf, -1.97336296703725e+248, 5.67124999519961e-294, 7.84290735856784e+224, 9.39822024799828e-277, -5.43714102455753e-92, 8.7653519101205e-205, -1.34238717279722e-12, 1.05967012771612e+90, 1.5436450673897e+237, NA, -3.56482267239908e+296, 1.77940483416764e-144, -7.58123087766868e+38, -57445786505731.1, 7.55947772570622e+289, 0), w_size = -1183062262L) result <- do.call(jmotif:::sax_via_window, testlist)
series_to_wordbag	62 bytes in 1 blocks are possibly lost in loss record 20 of 1,298	sax-vsm.cpp:29	No Address Trace found	Test code testlist <- list(a_size = 77314278L, n_threshold = 1.03791224547657e-279, nr_strategy = c(NA, "skeoubeovxrnlcqp", "ekexfkefqppbtkwklrpp", NA, "cyjywarehiyvcopnsnpo", "xhboovrs", "btxszykhowcjbsmcjfrf", "nghzbqaiounmtvqewjjv", NA, NA, "wcicexniy", "esokwasb", "uv", "pqeadqxkjfdnc", "t", NA, "lcmcngcmvvgsrvoxzugd", "gnmfeljlwqb", NA, "pbtqckncywddgqlcjjch", NA, NA, NA, "sccpzdytrucbfpvpdvpb", "vasyamnghglokiwuhctz", "sailmjsvvmftrgjcbpih", NA, "typjvwbnsahvgfcotbkh", NA, "", "iphzzymqnyxkznclxysh", "fszdiipwowddaxxrirhu", NA, "sbmpklmwhijkkuyexlkl", "hdztnvbbocsfkfqywlvg", "jghpzayotbysuelkeeue", "mdbtoxtjhtdclemryjxv", NA, NA, NA, "zknrdsnxijjx", "draeppzbtgnixvdgsvms", "ske", NA, "vqvbxbuocpoqlwocjqmm", NA, "fkachbvuysokoqfc", "hwzmzrfabnhupsadiqib", NA, NA, "hkqyiisehcbxugtmhqoh", NA, "uztncynfxckvwulnwlqq", "p", NA, "erbjqhsnfhqdnlbxsgss", "ufdbkpqcrhpznduhbgha", "a", "qvudwglqacvqpfmqrijx", "lxcqsmjycbdlavitlnde", "dwcbojewwujtndjvmtl", "ekydfpgstjoauizvebgi", "diimyq", "ixrjhblqlokoiy", NA, NA, "nfyisahjlhjfrh", "rfiutpwtgsatofsponib" ), paa_size = -1287526675L, ts = c(-6.45434794495422e-269, 6.72672283737528e-267, -1.02124486998706e-120, 4.05431857508005e+60, 2.95091562413324e+263, -1.45133819115277e+49, -82409851.1570325, 3.49751718907396e-108, -3.67964474202813e-207, 6100.12862689899, 2.80203688994811e-71, NA, NaN, -7.54697322665086e+122, -1.06800079725266e-256, -2.36990231096439e-55, 1.61481951459153e-81, -7.28100240278858e-203, -4.56570462327401e+117, Inf, -1.05830689192988e-132, 1.19510697426011e-85, -1.22520586987551e-34, Inf, -1.97336296703725e+248, 5.67124999519961e-294, 7.84290735856784e+224, 9.39822024799828e-277, -5.43714102455753e-92, 8.7653519101205e-205, -1.34238717279722e-12, 1.05967012771612e+90, 1.5436450673897e+237, NA, -3.56482267239908e+296, 1.77940483416764e-144, -7.58123087766868e+38, -57445786505731.1, 7.55947772570622e+289, 0), w_size = -1183062262L) result <- do.call(jmotif:::series_to_wordbag, testlist)
str_to_repair_grammar	62 bytes in 1 blocks are possibly lost in loss record 20 of 1,298	repair.cpp:521	No Address Trace found	Test code testlist <- list(str = c("rpomotxxsspagzjpybfz", "vpzkjovuacypafqpyu", NA, "egfpodiatdrekomlscww", "tefe", "komdhkgfntoemkjfpeh", NA, "mcjfotefmwwz", NA, NA, NA, "orrlmxzkxrjcrnjuzeuc", "eqgmdwti", "neboadsnkrzpzqvtwj", "ijuntjisivdvrzmm")) result <- do.call(jmotif:::str_to_repair_grammar, testlist)

Analyzed functions summary

function name	tested inputs	inputs with issues
alphabet_to_cuts	3	0
early_abandoned_dist	3	0
euclidean_dist	3	0
find_discords_brute_force	3	2
find_discords_hotsax	3	3
find_discords_rra	3	3
idx_to_letter	3	3
is_equal_mindist	3	3
is_equal_str	3	3
letters_to_idx	3	0
manyseries_to_wordbag	3	3
paa	3	1
sax_by_chunking	3	1
sax_via_window	3	3
series_to_chars	3	0
series_to_string	3	0
series_to_wordbag	3	3
str_to_repair_grammar	3	3
subseries	3	0
znorm	3	0

Report details

• Report generated by: 7403c04
• Inputs generator seed: 1661798651