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Issues list

Interpreting results
#377 opened Oct 11, 2024 by MaryGoAround
An unknown error happening
#376 opened Oct 2, 2024 by MaryGoAround
No off-target
#375 opened Sep 6, 2024 by El84Ja
A high duplication rate for WGS
#372 opened Aug 7, 2024 by MaryGoAround
Question regrading the results
#368 opened May 15, 2024 by maxanes
allelic copy number for segments
#364 opened Apr 13, 2024 by jennyp76
GATK segmentation might fail when all variants on a chromosome are filtered out. bug gatk4 All things related to GATK4/Mutect2
#343 opened Jan 16, 2024 by lima1
In case this may be of help
#338 opened Dec 15, 2023 by GuidoLeoni
Mutect2 drops MBQ to 20 in overlapped reads gatk4 All things related to GATK4/Mutect2
#320 opened Sep 6, 2023 by sleyn
CRAM compatibility
#244 opened Jun 27, 2022 by Jwong684
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